FastQCFastQC Report
Fri 8 Apr 2016
SLX-11269.C8GWUANXX.s_7.r_1

Summary

[OK]Basic Statistics

MeasureValue
FilenameSLX-11269.C8GWUANXX.s_7.r_1
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences235138491
Sequences flagged as poor quality0
Sequence length50
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA200750.026.7216531
TCTCGTA190050.024.66689141
CTCGTAT192700.024.3719442
ATCGGAA220650.024.3061392
CGTCTGA242350.021.63492616
CGTATGC223850.021.28489144
ACACGTC257650.020.52089713
TCGTATG232250.020.42039543
ACGTCTG277350.019.0553915
ATCTCGT251750.019.01485640
TCGGAAG291950.018.5509363
CGGAAGA329700.016.4002024
CACGTCT342250.015.63474714
CACACGT425900.012.86852112
GCACACG426600.012.79069611
TATCTCG137700.012.5631739
CACCGAT117550.012.29807331
ACCGATG118000.012.28925232
CGATGTA119000.012.16907134
CCGATGT131050.011.21682733
Produced by FastQC (version 0.11.2)