GeneProduct annotation


Name:HMGCS1
Identifier:ENSG00000112972
Database:Ensembl
Description:3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) [Source:HGNC Symbol;Acc:5007]
Chromosome:5




Expression data

IdentifierHMGCS1
ID8043.0
Chrom_Mchr5
Mito20.0
GeneInteractWiththisMitoGene0.0
Intact_interaction[IKBKE, nrdD, sdhA]
Ensemble_idENST00000325110
hPGC.wk4__PGCLC.log2FoldChange_abs0.7388389006
hPGC.wk4__PGCLC.log2FoldChange-0.7388389006
hPGC.wk4__PGCLC.pval0.9591755497
biotypeprotein_coding
coordinateschr5:43289497-43313595:-1
tlength3495.0
Blastocyst.CTR.log2RPKM8.6597739083
Naive.ESC.log2RPKM8.2092113752
PGCLC.D4.log2RPKM7.4521827566
hPGC.wk4.log2RPKM6.713343856
hPGC.wk5.5_M.log2RPKM5.5146666567
hPGC.wk7_M.log2RPKM4.8994913471
hPGC.wk7_F.log2RPKM4.8877236688
hSoma.wk4.log2RPKM9.6467656799
hSoma.wk7_M.log2RPKM8.3922621228
hSoma.wk7_F.log2RPKM7.9832517386
Line_id_in_Intact[137467, 240525, 241864]
id8043.0
reducedset0.0
withthegenesfound0.0





Cross references


Agilent
A_23_P133263
A_24_P63522
Ensembl
ENSG00000112972
Gene Wiki
3157
HGNC
HMGCS1
Illumina
0001690433
ILMN_1797728
Entrez Gene
3157
OMIM
142940
PDB
2P8U
RefSeq
NM_001098272
NM_002130
NP_001091742
NP_002121
Uniprot-TrEMBL
D6RIW1
Q01581
Q8N995
GeneOntology
GO:0001101
GO:0001889
GO:0003824
GO:0004421
GO:0005634
GO:0005737
GO:0005829
GO:0005886
GO:0006629
GO:0006695
GO:0007420
GO:0008144
GO:0008152
GO:0008299
GO:0008584
GO:0009645
GO:0009725
GO:0010243
GO:0014070
GO:0014074
GO:0016853
GO:0033197
GO:0034698
GO:0042493
GO:0042803
GO:0043177
GO:0044255
GO:0044281
GO:0046690
GO:0055094
GO:0070723
GO:0071372
GO:0071397
GO:0071407
UniGene
Hs.397729
Hs.602526
UCSC Genome Browser
uc003jnq.4
uc003jnr.4
WikiGenes
3157
Affy
11716987_a_at
11754918_s_at
221750_at
34517_at
54968_at
78228_s_at
8111941
89646_r_at
L25798_at