GeneProduct annotation


Name:TCF4
Identifier:ENSG00000196628
Database:Ensembl
Description:transcription factor 4 [Source:HGNC Symbol;Acc:11634]
Chromosome:18




Expression data

IdentifierTCF4
ID1001.0
Chrom_Mchr1
Mito20.0
GeneInteractWiththisMitoGene[MRPL10, HSPB7, CHCHD2, BCL2L2, MSRB3]
Intact_interaction[LMO4, NR2C2AP, TRAPPC2L, SZT2, AQP1, CTNNB1, FAH,
Ensemble_idENST00000354452
hPGC.wk4__PGCLC.log2FoldChange_abs0.0439748935
hPGC.wk4__PGCLC.log2FoldChange0.0439748935
hPGC.wk4__PGCLC.pval0.8393803528
biotypeprotein_coding
coordinateschr18:52889562-53255860:-1
tlength8312.0
Blastocyst.CTR.log2RPKM4.1399003213
Naive.ESC.log2RPKM6.221963899
PGCLC.D4.log2RPKM5.5029325864
hPGC.wk4.log2RPKM5.5469074799
hPGC.wk5.5_M.log2RPKM4.4200416836
hPGC.wk7_M.log2RPKM4.3605435375
hPGC.wk7_F.log2RPKM3.9773675887
hSoma.wk4.log2RPKM8.0192718943
hSoma.wk7_M.log2RPKM7.2526788713
hSoma.wk7_F.log2RPKM7.8796370155
Line_id_in_Intact[99789, 128040, 128041, 128042, 128046, 128048, 18
id1001.0
reducedset[MRPL10, HSPB7, CHCHD2, BCL2L2, MSRB3]
withthegenesfound[MSRB3#[PRDM4, PP2AA1, TCP14, MAPK8IP2, LNX2, TRIP





Cross references


Agilent
A_23_P27332
A_24_P918527
A_24_P931428
Ensembl
ENSG00000196628
Gene Wiki
6925
HGNC
TCF4
Illumina
0000510576
0103390538
ILMN_1814194
Entrez Gene
6925
OMIM
602272
610954
PDB
2KWF
RefSeq
NM_001083962
NM_001243226
NM_001243227
NM_001243228
NM_001243230
NM_001243231
NM_001243232
NM_001243233
NM_001243234
NM_001243235
NM_001243236
NM_003199
NP_001077431
NP_001230155
NP_001230156
NP_001230157
NP_001230159
NP_001230160
NP_001230161
NP_001230162
NP_001230163
NP_001230164
NP_001230165
NP_003190
Uniprot-TrEMBL
B7Z5M6
B7Z6Y1
E9PH57
G0LNT1
G0LNT2
G0LNT3
G0LNT4
G0LNT5
G0LNT7
G0LNT8
G0LNU4
G0LNU5
G0LNV2
H3BMC8
H3BME8
H3BNI2
H3BNZ2
H3BP59
H3BPG3
H3BPJ7
H3BRF7
H3BSX3
H3BT24
H3BT95
H3BTC3
H3BTM9
H3BTP3
H3BTZ0
H3BUQ3
K7ERJ0
P15884
GeneOntology
GO:0000122
GO:0000978
GO:0001011
GO:0001077
GO:0001087
GO:0001093
GO:0003677
GO:0003700
GO:0003714
GO:0005515
GO:0005634
GO:0005667
GO:0006352
GO:0006355
GO:0006367
GO:0008022
GO:0045666
GO:0045893
GO:0045944
GO:0046982
GO:0046983
GO:0065004
GO:0070888
UniGene
Hs.599356
Hs.605153
Hs.606264
Hs.624776
Hs.713740
Hs.719509
Hs.742885
UCSC Genome Browser
uc002lfw.4
uc002lfx.2
uc002lfy.2
uc002lfz.2
uc002lga.3
uc002lgc.4
uc010dph.1
uc010dpi.3
uc010xdu.1
uc010xdv.1
uc010xdw.1
uc010xdx.1
uc010xdy.1
uc021ukg.1
uc021ukh.1
uc021uki.1
uc021ukj.1
uc021ukk.1
uc021ukl.1
uc021ukm.1
uc021ukp.1
WikiGenes
6925
Affy
11724239_at
11724240_at
11724241_at
11724242_s_at
11724243_at
11724244_s_at
11745765_x_at
11747698_x_at
11754605_a_at
11754733_a_at
203753_at
36605_at
56764_at
56847_at
8023415
89997_at
M74719_at