GeneProduct annotation


Identifier:CASP6
Database:HGNC
Description:caspase 6, apoptosis-related cysteine peptidase
Synonyms:MCH2




Expression data

IdentifierCASP6
ID15462.0
Chrom_Mchr4
Mito20.0
GeneInteractWiththisMitoGene[NUCB2]
Intact_interaction[NUCB1, SATB1, CASP6, APP, CASP3, IKBKG, ATG16L1,
Ensemble_idENST00000265164
hPGC.wk4__PGCLC.log2FoldChange_abs1.900090787
hPGC.wk4__PGCLC.log2FoldChange-1.900090787
hPGC.wk4__PGCLC.pval0.4857464681
biotypeprotein_coding
coordinateschr4:110609898-110624629:-1
tlength1541.0
Blastocyst.CTR.log2RPKM6.7541865047
Naive.ESC.log2RPKM6.3328528694
PGCLC.D4.log2RPKM6.3354286182
hPGC.wk4.log2RPKM4.4353378311
hPGC.wk5.5_M.log2RPKM3.1111297498
hPGC.wk7_M.log2RPKM4.6236388612
hPGC.wk7_F.log2RPKM5.161490941
hSoma.wk4.log2RPKM5.5584208745
hSoma.wk7_M.log2RPKM6.9088401337
hSoma.wk7_F.log2RPKM7.0799648627
Line_id_in_Intact[191282, 254549, 287336, 287491, 289145, 299989, 3
id15462.0
reducedset[NUCB2]
withthegenesfound[NUCB2#[XPO1, CASP6, GNAI3, CASP7, GADD45A]]





Cross references


Agilent
A_23_P500799
Ensembl
ENSG00000138794
Gene Wiki
839
HGNC
CASP6
Illumina
0002690176
0002690440
ILMN_1659350
ILMN_1694877
ILMN_2367113
Entrez Gene
839
OMIM
601532
PDB
1MI9
2WDP
3K7E
3NKF
3NR2
3OD5
3P45
3P4U
3QNW
3S70
3S8E
3V6L
3V6M
4EJF
4FXO
RefSeq
NM_001226
NM_032992
NP_001217
NP_116787
Uniprot-TrEMBL
D6RBM3
D6RHU3
P55212
GeneOntology
GO:0004197
GO:0005515
GO:0005634
GO:0005654
GO:0005737
GO:0005829
GO:0006508
GO:0006915
GO:0006917
GO:0006921
GO:0008234
UniGene
Hs.654616
UCSC Genome Browser
uc003hzn.1
uc003hzo.1
WikiGenes
839
Affy
11736215_x_at
209790_s_at
35662_at
8102311
U20536_s_at