GeneProduct annotation


Identifier:PTPN13
Database:HGNC
Description:protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
Synonyms:PTPL1




Expression data

IdentifierPTPN13
ID921.0
Chrom_Mchr4
Mito20.0
GeneInteractWiththisMitoGene0.0
Intact_interaction[PDCD10, RAPGEF6, PKN2, NFKBIA, FAS, APC, PLEKHA1]
Ensemble_idENST00000436978
hPGC.wk4__PGCLC.log2FoldChange_abs0.5699458035
hPGC.wk4__PGCLC.log2FoldChange-0.5699458035
hPGC.wk4__PGCLC.pval0.9975533006
biotypeprotein_coding
coordinateschr4:87515468-87736324:1
tlength8525.0
Blastocyst.CTR.log2RPKM0.9084159734
Naive.ESC.log2RPKM7.6943701052
PGCLC.D4.log2RPKM6.6013106043
hPGC.wk4.log2RPKM6.0313648008
hPGC.wk5.5_M.log2RPKM3.9912200809
hPGC.wk7_M.log2RPKM3.0338237238
hPGC.wk7_F.log2RPKM4.6407271759
hSoma.wk4.log2RPKM8.2150838719
hSoma.wk7_M.log2RPKM5.560323364
hSoma.wk7_F.log2RPKM4.994390354
Line_id_in_Intact[24925, 49416, 49418, 49420, 49421, 58347, 58348,
id921.0
reducedset0.0
withthegenesfound0.0





Cross references


Agilent
A_14_P103652
A_14_P106024
A_14_P137631
A_23_P18493
Ensembl
ENSG00000163629
Gene Wiki
5783
HGNC
PTPN13
Illumina
0005570725
ILMN_1652805
ILMN_2374683
ILMN_2374687
Entrez Gene
5783
OMIM
600267
PDB
1D5G
1Q7X
1WCH
3LNX
3LNY
3PDZ
RefSeq
NM_006264
NM_080683
NM_080684
NM_080685
NP_006255
NP_542414
NP_542415
NP_542416
Uniprot-TrEMBL
D6R9M4
D6R9X4
Q12923
Q4W5F5
GeneOntology
GO:0004725
GO:0005515
GO:0005634
GO:0005737
GO:0005856
GO:0005886
GO:0006470
GO:0016311
GO:0016791
GO:0030027
GO:0035335
UniGene
Hs.436142
UCSC Genome Browser
uc003hpy.3
uc003hpz.3
uc003hqa.3
uc003hqb.3
WikiGenes
5783
Affy
11722317_a_at
11730524_a_at
1629_s_at
204201_s_at
34198_at
8096176
81722_i_at
81724_r_at
91188_at