GeneProduct annotation


Name:BRCA1
Identifier:ENSG00000012048
Database:Ensembl
Description:breast cancer 1, early onset [Source:HGNC Symbol;Acc:1100]
Chromosome:17




Expression data

IdentifierBRCA1
ENSEMBL.IDENST00000309486
biotypeprotein_coding
coordinateschr17:41196313-41277468:-1
tlength7092.0
Blastocyst.CTR3.12ctr3.14.764385076
Blastocyst.CTR3.12ctr3.25.026015764
Blastocyst.CTR5.12ctr5.12.206641326
Blastocyst.CTR5.12ctr5.21.744018792
Blastocyst.F1.6ctr12.804043349
Blastocyst.F2.6ctr21.623892777
Blastocyst.F3.6ctr3-0.525466171
Blastocyst.F4.6ctr43.95476861
Blastocyst.F5.6ctr54.888258705
Blastocyst.F6.6ctr65.614120261
Naive.ESC.15.639633042
Naive.ESC.25.575505152
EpiLC.D2.14.800909256
EpiLC.D2.24.744789117
PGCLC.D4.15.517835564
PGCLC.D4.25.420111263
PGCLC_Average5.4689734135
TCam2.15.32246943
TCam2.24.821309994
hPGC_wk46.44805209
hPGC.E39_M5.993499463
hPGC.E45_M5.455567064
hPGC.E48_M5.757413993
hPGC.E47_F5.450810591
hPGC.E48_F5.633455831
hPGC.E51_F5.747764332
hPGC.E60_M.16.763805297
hPGC.E60_M.25.96359698
hPGC.E60_F5.937514406
hPGC.E63_F6.432686397
hSoma_wk45.289489817
hSoma.E46_M4.713047098
hSoma.E48_M3.606638711
hSoma.E47_F2.936246279
hSoma.E48_F3.624052908
hSoma.E51_F2.633279206
hPGC_wk4__Blastocyst.F.log2FoldChange2.320667512
hPGC_wk4__Blastocyst.F.pval0.538118273
PGCLC__Blastocyst.F.log2FoldChange1.342416125
PGCLC__Blastocyst.F.pval0.769303047
Blastocyst.F__Blastocyst.CTR3.log2FoldChange-0.773738527
Blastocyst.F__Blastocyst.CTR3.pval0.776285709
hPGC_wk4__PGCLC.log2FoldChange0.978251387
hPGC_wk4__PGCLC.pval0.625649751





Cross references


Agilent
A_23_P207400
A_32_P171695
Ensembl
ENSG00000012048
Gene Wiki
672
HGNC
BRCA1
Illumina
0000510746
0006660739
ILMN_1666652
ILMN_1738027
ILMN_2311089
Entrez Gene
672
OMIM
113705
114480
167000
604370
614320
PDB
1JM7
1JNX
1N5O
1OQA
1T15
1T29
1T2U
1T2V
1Y98
2ING
3COJ
3K0H
3K0K
3K15
3K16
3PXA
3PXB
3PXC
3PXD
3PXE
RefSeq
NM_007294
NM_007297
NM_007298
NM_007299
NM_007300
NP_009225
NP_009228
NP_009229
NP_009230
NP_009231
Uniprot-TrEMBL
B4DES0
B7ZA85
C4PFY7
C6YB45
C9IZW4
E7EMP0
E7EN90
E7ENB7
E7EP70
E7EQW4
E7ETR2
E7EUM2
E7EWN5
E9PC22
E9PFC7
E9PFZ0
E9PH68
F8W8H7
G1UI37
G3XAC3
G4V4Z7
G4V4Z8
G4V500
G4V502
G4V503
H0Y881
H0Y8B8
K4JUB1
K4JXS7
K4K7U9
K4K7V3
K7EJW3
K7EPC7
P38398
Q3B891
Q3LRH8
Q3YB49
Q3YB50
Q3YB53
Q4EW25
Q7KYU6
Q92897
Q9NQR3
Q9UE29
GeneOntology
GO:0000151
GO:0000724
GO:0000793
GO:0000794
GO:0001726
GO:0003677
GO:0003684
GO:0003713
GO:0003723
GO:0004842
GO:0005515
GO:0005634
GO:0005654
GO:0005694
GO:0005737
GO:0005886
GO:0005925
GO:0006260
GO:0006281
GO:0006301
GO:0006302
GO:0006349
GO:0006357
GO:0006359
GO:0006633
GO:0006915
GO:0006974
GO:0006978
GO:0007059
GO:0007098
GO:0008270
GO:0008274
GO:0008630
GO:0009048
GO:0010212
GO:0015631
GO:0016567
GO:0019899
GO:0030521
GO:0030529
GO:0031398
GO:0031436
GO:0031572
GO:0031625
GO:0031941
GO:0034446
GO:0035066
GO:0035067
GO:0042127
GO:0042981
GO:0043009
GO:0043234
GO:0043627
GO:0044030
GO:0044212
GO:0045717
GO:0045739
GO:0045892
GO:0045893
GO:0045944
GO:0046600
GO:0050681
GO:0051571
GO:0051572
GO:0051573
GO:0051574
GO:0051865
GO:0070512
GO:0070531
GO:0071158
GO:0071681
GO:0085020
GO:2000145
GO:2000617
GO:2000620
UniGene
Hs.194143
Hs.622171
UCSC Genome Browser
uc002icq.3
uc002ict.3
uc002icu.3
uc002idc.1
uc010cyx.3
uc010cyy.1
uc010cza.2
uc010whl.2
uc010whm.2
uc010whn.2
uc010who.2
uc010whp.2
uc010whq.1
uc010whr.1
uc010whs.1
uc010wht.1
WikiGenes
672
Affy
11735584_x_at
11744317_x_at
11749632_a_at
11750373_a_at
11755416_x_at
1993_s_at
204531_s_at
33724_at
604_at
69578_at
8015769
83730_at
L78833_cds1_at
U64805_s_at