GeneProduct annotation


Name:SMARCAL1
Identifier:ENSG00000138375
Database:Ensembl
Description:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:HGNC Symbol;Acc:11102]
Chromosome:2




Expression data

IdentifierSMARCAL1
ENSEMBL.IDENST00000357276
biotypeprotein_coding
coordinateschr2:217277137-217347776:1
tlength3253.0
Blastocyst.CTR3.12ctr3.12.137485903
Blastocyst.CTR3.12ctr3.22.641888092
Blastocyst.CTR5.12ctr5.10.523708118
Blastocyst.CTR5.12ctr5.20.546512411
Blastocyst.F1.6ctr10.758540062
Blastocyst.F2.6ctr20.748314491
Blastocyst.F3.6ctr30.598955542
Blastocyst.F4.6ctr40.686872901
Blastocyst.F5.6ctr51.368824229
Blastocyst.F6.6ctr60.31227722
Naive.ESC.14.814879015
Naive.ESC.25.192966877
EpiLC.D2.15.259750009
EpiLC.D2.25.218956869
PGCLC.D4.14.433137214
PGCLC.D4.24.770730614
PGCLC_Average4.601933914
TCam2.13.872497885
TCam2.24.044415983
hPGC_wk44.872034086
hPGC.E39_M3.863783171
hPGC.E45_M5.63191657
hPGC.E48_M5.26135892
hPGC.E47_F5.776372177
hPGC.E48_F5.299004137
hPGC.E51_F5.357612873
hPGC.E60_M.15.082410964
hPGC.E60_M.24.744319976
hPGC.E60_F5.151487705
hPGC.E63_F5.240163423
hSoma_wk44.521281629
hSoma.E46_M5.093239791
hSoma.E48_M4.666571698
hSoma.E47_F5.11085375
hSoma.E48_F4.564874684
hSoma.E51_F4.530735769
hPGC_wk4__Blastocyst.F.log2FoldChange4.089585949
hPGC_wk4__Blastocyst.F.pval0.238699308
PGCLC__Blastocyst.F.log2FoldChange3.829338018
PGCLC__Blastocyst.F.pval0.191585334
Blastocyst.F__Blastocyst.CTR3.log2FoldChange-1.629171442
Blastocyst.F__Blastocyst.CTR3.pval0.58626896
hPGC_wk4__PGCLC.log2FoldChange0.260247932
hPGC_wk4__PGCLC.pval0.764246707





Cross references


Agilent
A_14_P118292
A_23_P131337
A_33_P3217834
Ensembl
ENSG00000138375
Gene Wiki
50485
HGNC
SMARCAL1
Illumina
0006510072
ILMN_1752111
Entrez Gene
50485
OMIM
242900
606622
RefSeq
NM_001127207
NM_014140
NP_001120679
NP_054859
Uniprot-TrEMBL
C9J6I8
C9J8F8
C9JHQ1
C9JP32
H7BYI2
H7C051
Q9NZC9
GeneOntology
GO:0000733
GO:0003676
GO:0003677
GO:0004386
GO:0005524
GO:0005634
GO:0006259
GO:0006357
GO:0008094
GO:0016568
GO:0036310
UniGene
Hs.516674
UCSC Genome Browser
uc002vgc.4
uc002vgd.4
uc010fvg.3
WikiGenes
50485
Affy
11756927_a_at
218452_at
54718_g_at
65468_at
8048175