GeneProduct annotation


Name:COL2A1
Identifier:ENSG00000139219
Database:Ensembl
Description:collagen, type II, alpha 1 [Source:HGNC Symbol;Acc:2200]
Chromosome:12




Expression data

IdentifierCOL2A1
ENSEMBL.IDENST00000380518
biotypeprotein_coding
coordinateschr12:48366748-48398269:-1
tlength5017.0
Blastocyst.CTR3.12ctr3.1-1.394458808
Blastocyst.CTR3.12ctr3.2-2.375483446
Blastocyst.CTR5.12ctr5.1-0.101345998
Blastocyst.CTR5.12ctr5.2-0.078541705
Blastocyst.F1.6ctr10.133485946
Blastocyst.F2.6ctr20.123260375
Blastocyst.F3.6ctr3-0.026098573
Blastocyst.F4.6ctr40.061818786
Blastocyst.F5.6ctr50.743770113
Blastocyst.F6.6ctr6-0.312776896
Naive.ESC.12.282934304
Naive.ESC.21.904947748
EpiLC.D2.15.425372074
EpiLC.D2.24.939677591
PGCLC.D4.16.617198478
PGCLC.D4.25.976528602
PGCLC_Average6.29686354
TCam2.1-3.850588314
TCam2.20.200938348
hPGC_wk44.916831368
hPGC.E39_M0.477916719
hPGC.E45_M0.377505834
hPGC.E48_M2.142765331
hPGC.E47_F0.224527908
hPGC.E48_F-1.617604425
hPGC.E51_F0.30071297
hPGC.E60_M.1-0.149300724
hPGC.E60_M.23.401853063
hPGC.E60_F2.122043334
hPGC.E63_F-1.657909187
hSoma_wk49.449054063
hSoma.E46_M7.64114155
hSoma.E48_M6.971849422
hSoma.E47_F5.907756548
hSoma.E48_F6.112033746
hSoma.E51_F5.991257385
hPGC_wk4__Blastocyst.F.log2FoldChange4.759437347
hPGC_wk4__Blastocyst.F.pval0.1357764
PGCLC__Blastocyst.F.log2FoldChange6.174744549
PGCLC__Blastocyst.F.pval0.015922365
Blastocyst.F__Blastocyst.CTR3.log2FoldChange1.960537436
Blastocyst.F__Blastocyst.CTR3.pval0.910611105
hPGC_wk4__PGCLC.log2FoldChange-1.415307201
hPGC_wk4__PGCLC.pval0.926880851





Cross references


Agilent
A_23_P500464
Ensembl
ENSG00000139219
Gene Wiki
1280
HGNC
COL2A1
Illumina
0002260373
0005130121
ILMN_1674785
ILMN_1686538
ILMN_1742840
Entrez Gene
1280
OMIM
108300
120140
132450
150600
151210
156550
183900
184250
200610
271700
604864
608805
609162
609508
PDB
1U5M
2FSE
2SEB
RefSeq
NM_001844
NM_033150
NP_001835
NP_149162
Uniprot-TrEMBL
P02458
GeneOntology
GO:0001501
GO:0001502
GO:0001503
GO:0001894
GO:0001958
GO:0002062
GO:0003007
GO:0005201
GO:0005515
GO:0005576
GO:0005581
GO:0005585
GO:0005604
GO:0005615
GO:0005737
GO:0005788
GO:0006029
GO:0007411
GO:0007417
GO:0007601
GO:0007605
GO:0010468
GO:0022617
GO:0030020
GO:0030198
GO:0030199
GO:0030574
GO:0030903
GO:0031012
GO:0035108
GO:0042472
GO:0042802
GO:0043066
GO:0046872
GO:0048407
GO:0048705
GO:0048839
GO:0051216
GO:0060021
GO:0060174
GO:0060272
GO:0060348
GO:0060351
GO:0071599
GO:0071773
UniGene
Hs.408182
UCSC Genome Browser
uc001rqu.3
uc001rqv.3
uc009zkw.3
WikiGenes
1280
Affy
11757309_a_at
213492_at
37605_at
598_at
7962703
85915_at
J00116_s_at
M60299_at
X06268_at