Protein annotation


Name:SHMT1
Identifier:6470
Database:Entrez Gene
Synonyms:CSHMT




Expression data

IdentifierSHMT1
ENSEMBL.IDENST00000582352
biotypeprotein_coding
coordinateschr17:18233998-18236753:-1
tlength2755.0
Blastocyst.CTR3.12ctr3.11.640238813
Blastocyst.CTR3.12ctr3.22.489289173
Blastocyst.CTR5.12ctr5.10.763426621
Blastocyst.CTR5.12ctr5.20.786230915
Blastocyst.F1.6ctr15.642114755
Blastocyst.F2.6ctr21.988032994
Blastocyst.F3.6ctr30.838674046
Blastocyst.F4.6ctr40.926591405
Blastocyst.F5.6ctr51.608542732
Blastocyst.F6.6ctr60.551995724
Naive.ESC.11.617192206
Naive.ESC.22.386391728
EpiLC.D2.12.056525016
EpiLC.D2.22.610678466
PGCLC.D4.13.417200842
PGCLC.D4.23.211361812
PGCLC_Average3.314281327
TCam2.11.714624023
TCam2.22.613198763
hPGC_wk4-0.93264153
hPGC.E39_M4.757726838
hPGC.E45_M0.827240954
hPGC.E48_M3.045012656
hPGC.E47_F2.963769645
hPGC.E48_F0.247168195
hPGC.E51_F-0.097548816
hPGC.E60_M.11.899896467
hPGC.E60_M.22.566185965
hPGC.E60_F2.740655366
hPGC.E63_F2.831354297
hSoma_wk43.187814799
hSoma.E46_M2.548181221
hSoma.E48_M2.45507909
hSoma.E47_F1.728135048
hSoma.E48_F1.582200766
hSoma.E51_F2.085956098
hPGC_wk4__Blastocyst.F.log2FoldChange-4.304464632
hPGC_wk4__Blastocyst.F.pval0.718189383
PGCLC__Blastocyst.F.log2FoldChange-0.053873829
PGCLC__Blastocyst.F.pval1.0
Blastocyst.F__Blastocyst.CTR3.log2FoldChange1.245480153
Blastocyst.F__Blastocyst.CTR3.pval0.898153019
hPGC_wk4__PGCLC.log2FoldChange-4.250590803
hPGC_wk4__PGCLC.pval0.485545365





Cross references


Agilent
A_23_P502654
A_24_P205364
A_33_P3362048
Ensembl
ENSG00000176974
Gene Wiki
6470
HGNC
SHMT1
Illumina
0000380156
0000380341
ILMN_1743784
ILMN_1811933
ILMN_2402463
Entrez Gene
6470
6470
OMIM
182144
PDB
1BJ4
RefSeq
NM_004169
NM_148918
NP_004160
NP_683718
Uniprot-TrEMBL
B4DPM9
J3KRK5
J3KRZ5
P34896
Q9UMC9
GeneOntology
GO:0004372
GO:0005634
GO:0005737
GO:0005739
GO:0005829
GO:0006544
GO:0006545
GO:0006563
GO:0006565
GO:0006766
GO:0006767
GO:0008168
GO:0008242
GO:0008732
GO:0009058
GO:0009113
GO:0016597
GO:0019264
GO:0030170
GO:0034641
GO:0035999
GO:0042802
GO:0042803
GO:0044281
GO:0045329
GO:0046655
GO:0051262
GO:0051289
UniGene
Hs.513987
Hs.736265
UCSC Genome Browser
uc002gta.3
uc002gtb.3
uc010vxt.2
uc010vxu.1
WikiGenes
6470
Affy
11733969_a_at
11740366_a_at
11751011_x_at
11756209_x_at
11762240_at
209980_s_at
34738_at
712_s_at
78803_at
8013243
L11931_at