GeneProduct annotation


Name:SHMT2
Identifier:6472
Database:Entrez Gene
Synonyms:GLYA




Expression data

IdentifierSHMT2
ENSEMBL.IDENST00000554467
biotypeprotein_coding
coordinateschr12:57623494-57628509:1
tlength3410.0
Blastocyst.CTR3.12ctr3.18.723882336
Blastocyst.CTR3.12ctr3.28.750475907
Blastocyst.CTR5.12ctr5.110.57205116
Blastocyst.CTR5.12ctr5.210.650939
Blastocyst.F1.6ctr10.690539145
Blastocyst.F2.6ctr24.002241669
Blastocyst.F3.6ctr38.88850663
Blastocyst.F4.6ctr45.078303603
Blastocyst.F5.6ctr51.300823312
Blastocyst.F6.6ctr61.829238804
Naive.ESC.17.589728031
Naive.ESC.27.808957837
EpiLC.D2.16.95092942
EpiLC.D2.27.226583657
PGCLC.D4.15.327661591
PGCLC.D4.25.802818022
PGCLC_Average5.5652398065
TCam2.17.90675049
TCam2.27.710396802
hPGC_wk45.329494658
hPGC.E39_M5.404203728
hPGC.E45_M5.43440492
hPGC.E48_M5.352757824
hPGC.E47_F5.836863542
hPGC.E48_F5.047973231
hPGC.E51_F5.35495271
hPGC.E60_M.14.768499819
hPGC.E60_M.24.873176388
hPGC.E60_F4.833219678
hPGC.E63_F4.715060948
hSoma_wk46.053924835
hSoma.E46_M5.871717953
hSoma.E48_M5.271480982
hSoma.E47_F5.547527545
hSoma.E48_F5.361944187
hSoma.E51_F5.462734852
hPGC_wk4__Blastocyst.F.log2FoldChange-1.139096938
hPGC_wk4__Blastocyst.F.pval1.0
PGCLC__Blastocyst.F.log2FoldChange-0.883877775
PGCLC__Blastocyst.F.pval0.821418702
Blastocyst.F__Blastocyst.CTR3.log2FoldChange-2.2686488
Blastocyst.F__Blastocyst.CTR3.pval0.42321007
hPGC_wk4__PGCLC.log2FoldChange-0.255219163
hPGC_wk4__PGCLC.pval1.0





Cross references


Agilent
A_14_P122852
A_23_P158239
A_23_P169629
Ensembl
ENSG00000182199
Gene Wiki
6472
HGNC
SHMT2
Illumina
0000580647
ILMN_1661264
Entrez Gene
6472
OMIM
138450
PDB
3OU5
RefSeq
NM_001166356
NM_001166357
NM_001166358
NM_001166359
NM_005412
NP_001159828
NP_001159829
NP_001159830
NP_001159831
NP_005403
Uniprot-TrEMBL
B4DLV4
G3V241
G3V2D2
G3V2E4
G3V2W0
G3V2Y1
G3V2Y4
G3V3C6
G3V3Y8
G3V4T0
G3V4W5
G3V4X0
G3V540
G3V5L0
P34897
GeneOntology
GO:0003682
GO:0004372
GO:0005739
GO:0005743
GO:0005758
GO:0005759
GO:0006544
GO:0006545
GO:0006563
GO:0006564
GO:0006730
GO:0008168
GO:0008284
GO:0008732
GO:0015630
GO:0016597
GO:0019264
GO:0030170
GO:0035999
GO:0042645
GO:0042802
GO:0051289
UniGene
Hs.741179
UCSC Genome Browser
uc001snf.2
uc001sng.2
uc001snh.2
uc001sni.2
uc001snj.2
uc001snk.2
uc009zpk.2
uc010srh.2
uc010sri.2
WikiGenes
6472
Affy
11746438_a_at
11747537_x_at
11750992_x_at
11756615_x_at
214096_s_at
214437_s_at
36178_at
7956401
U23143_at