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Gene/Protein found in pathways (n): 5488
Gene/Protein meeting criterion (r): 5488
Criterion for Z score (z): [hPGC_wk4] <> [PGCLC_Average]

Dataset: /home/USSR/mg771/AveragedPGCLCD4.pgex
Pathway directory: wikipathways_Homo_sapiens_Curation-AnalysisCollection__gpml
Gene database: /home/USSR/mg771/PathvisioPathway/metabolites_20140516.bridge, /home/USSR/mg771/PathvisioPathway/Hs_Derby_20130701.bridge, /home/USSR/mg771/PathvisioPathway/metabolites_20140516.bridge, /home/USSR/mg771/PathvisioPathway/Hs_Derby_20130701.bridge

Pathway	n	r	z
Calcium Regulation in the Cardiac Cell	136	136	NaN
Urea cycle and metabolism of amino groups	19	19	NaN
GPCRs, Other	59	59	NaN
Glutathione metabolism	17	17	NaN
Gene regulatory network modelling somitogenesis	9	9	NaN
Hypothetical Network for Drug Addiction	31	31	NaN
TGF Beta Signaling Pathway	52	52	NaN
Alzheimers Disease	77	77	NaN
Regulation of toll-like receptor signaling pathway	119	119	NaN
Constitutive Androstane Receptor Pathway	25	25	NaN
Secretion of Hydrochloric Acid in Parietal Cells	2	2	NaN
Trans-sulfuration pathway	10	10	NaN
mRNA Processing	125	125	NaN
Pentose Phosphate Pathway	7	7	NaN
Focal Adhesion	184	184	NaN
p38 MAPK Signaling Pathway	34	34	NaN
TCA Cycle and PDHc	16	16	NaN
Bladder Cancer	30	30	NaN
Oxidative phosphorylation	51	51	NaN
Cell Differentiation - Index	10	10	NaN
Parkin-Ubiquitin Proteasomal System pathway	67	67	NaN
Cori Cycle	12	12	NaN
Hypoxia-mediated EMT and Stemness	2	2	NaN
Osteoblast Signaling	11	11	NaN
Fluoropyrimidine Activity	31	31	NaN
TSLP Signaling Pathway	45	45	NaN
Oxidation by Cytochrome P450	48	48	NaN
Integrated Pancreatic Cancer Pathway	192	192	NaN
TWEAK Signaling Pathway	42	42	NaN
Globo Sphingolipid Metabolism	22	22	NaN
Complement and Coagulation Cascades	47	47	NaN
Semaphorin interactions	61	61	NaN
Diurnally Regulated Genes with Circadian Orthologs	46	46	NaN
Interactome of polycomb repressive complex 2 (PRC2)	16	16	NaN
Folate Metabolism	50	50	NaN
Membrane Trafficking	76	76	NaN
Statin Pathway	22	22	NaN
Interferon type I signaling pathways	54	54	NaN
PDGF Pathway	38	38	NaN
AGE/RAGE pathway	62	62	NaN
Alanine and aspartate metabolism	10	10	NaN
Myometrial Relaxation and Contraction Pathways	146	146	NaN
Cardiac Progenitor Differentiation	46	46	NaN
ErbB Signaling Pathway	52	52	NaN
Mitochondrial LC-Fatty Acid Beta-Oxidation	17	17	NaN
Complement Activation, Classical Pathway	10	10	NaN
AMPK Signaling	64	64	NaN
Catalytic cycle of mammalian FMOs	4	4	NaN
TFs Regulate miRNAs related to cardiac hypertrophy	8	8	NaN
DDX1 as a regulatory component of the Drosha microprocessor	7	7	NaN
Hair Follicle Development: Induction (Part 1 of 3)	42	42	NaN
Blood Clotting Cascade	13	13	NaN
IL1 and megakaryotyces in obesity	20	20	NaN
FSH signaling pathway	23	23	NaN
Synaptic Vesicle Pathway	44	44	NaN
T-Cell Receptor and Co-stimulatory Signaling	26	26	NaN
Tamoxifen metabolism	15	15	NaN
Integrated Cancer pathway	44	44	NaN
Amino acid conjugation of benzoic acid	3	3	NaN
Heart Development	41	41	NaN
Angiogenesis	24	24	NaN
Serotonin Transporter Activity	11	11	NaN
Codeine and Morphine Metabolism	8	8	NaN
Methylation Pathways	7	7	NaN
mir34a and TGIF2 in osteoclastogenesis	1	1	NaN
Extracellular vesicle-mediated signaling in recipient cells	29	29	NaN
Deregulation of Rab and Rab Effector Genes in Bladder Cancer	16	16	NaN
Parkinsons Disease Pathway	39	39	NaN
Spinal Cord Injury	100	100	NaN
Eukaryotic Transcription Initiation	41	41	NaN
Nucleotide GPCRs	9	9	NaN
Vitamin B12 Metabolism	37	37	NaN
Wnt Signaling Pathway and Pluripotency	96	96	NaN
Adipogenesis	120	120	NaN
Nicotine Metabolism	2	2	NaN
Small Ligand GPCRs	13	13	NaN
Arrhythmogenic Right Ventricular Cardiomyopathy	64	64	NaN
EPO Receptor Signaling	25	25	NaN
RalA downstream regulated genes	12	12	NaN
EGF/EGFR Signaling Pathway	159	159	NaN
Selenium Micronutrient Network	63	63	NaN
EBV LMP1 signaling	22	22	NaN
Differentiation Pathway	44	44	NaN
Glucose Homeostasis	0	0	NaN
TSH signaling pathway	64	64	NaN
Insulin Signaling	158	158	NaN
Wnt Signaling Pathway	62	62	NaN
G1 to S cell cycle control	66	66	NaN
IL17 signaling pathway	26	26	NaN
Monoamine GPCRs	23	23	NaN
IL-1 signaling pathway	55	55	NaN
B Cell Receptor Signaling Pathway	94	94	NaN
RNA interference	5	5	NaN
Interleukin-11 Signaling Pathway	43	43	NaN
Gastric acid production	1	1	NaN
Alpha 6 Beta 4 signaling pathway	33	33	NaN
Acetylcholine Synthesis	5	5	NaN
Oxytocin signaling	4	4	NaN
TCA Cycle	17	17	NaN
Neurotransmitter Clearance In The Synaptic Cleft	4	4	NaN
Gastric cancer network 2	30	30	NaN
Proteasome Degradation	60	60	NaN
TarBasePathway	12	12	NaN
ATM Signaling Pathway	41	41	NaN
Cytokines and Inflammatory Response	16	16	NaN
Type III interferon signaling	7	7	NaN
Sphingolipid Metabolism	20	20	NaN
Mesodermal Commitment Pathway	67	67	NaN
Translation Factors	50	50	NaN
Physiological and Pathological Hypertrophy of the Heart	23	23	NaN
Cholesterol Biosynthesis	15	15	NaN
Primary Focal Segmental Glomerulosclerosis FSGS	69	69	NaN
Effects of Nitric Oxide	6	6	NaN
Cardiac Hypertrophic Response	53	53	NaN
Homologous recombination	13	13	NaN
Heme Biosynthesis	9	9	NaN
Eicosanoid Synthesis	18	18	NaN
NLR Proteins	8	8	NaN
Nucleotide Metabolism	19	19	NaN
Glucuronidation	11	11	NaN
SIDS Susceptibility Pathways	144	144	NaN
Gastric Cancer Network 1	28	28	NaN
BDNF signaling pathway	142	142	NaN
Regulation of Actin Cytoskeleton	139	139	NaN
Apoptosis	81	81	NaN
TGF beta Signaling Pathway	129	129	NaN
IL-9 Signaling Pathway	15	15	NaN
Serotonin Receptor 2 and ELK-SRF/GATA4 signaling	20	20	NaN
IL-2 Signaling Pathway	40	40	NaN
Estrogen Receptor Pathway	12	12	NaN
miRNA Biogenesis	6	6	NaN
Glial Cell Differentiation	7	7	NaN
Pilocytic astrocytoma	4	4	NaN
Notch Signaling Pathway	58	58	NaN
RANKL/RANK Signaling Pathway	54	54	NaN
Allograft Rejection	56	56	NaN
Cell Cycle	101	101	NaN
Structural Pathway of Interleukin 1 (IL-1)	48	48	NaN
Osteopontin Signaling	12	12	NaN
Wnt Signaling Pathway Netpath	50	50	NaN
Aryl Hydrocarbon Receptor Pathway	36	36	NaN
Endochondral Ossification	57	57	NaN
Steroid Biosynthesis	8	8	NaN
Neural Crest Differentiation	91	91	NaN
Ovarian Infertility Genes	31	31	NaN
ID signaling pathway	15	15	NaN
Estrogen metabolism	15	15	NaN
Arachidonate Epoxygenase / Epoxide Hydrolase	6	6	NaN
Serotonin Receptor 4/6/7 and NR3C Signaling	17	17	NaN
Glycerophospholipid Biosynthetic Pathway	21	21	NaN
ACE Inhibitor Pathway	10	10	NaN
Butyrate-induced histone acetylation	2	2	NaN
Synthesis and Degradation of Ketone Bodies	4	4	NaN
One carbon donor	1	1	NaN
Vitamin D Metabolism	9	9	NaN
Thyroxine (Thyroid Hormone) Production	4	4	NaN
G13 Signaling Pathway	36	36	NaN
GPCRs, Class B Secretin-like	19	19	NaN
DNA Replication	42	42	NaN
Drug Induction of Bile Acid Pathway	12	12	NaN
Fatty Acid Omega Oxidation	11	11	NaN
HIF1A and PPARG regulation of glycolysis	0	0	NaN
PCSK9-mediated LDLR degradation	1	1	NaN
Histone Modifications	55	55	NaN
MAPK Cascade	29	29	NaN
Prostaglandin Synthesis and Regulation	25	25	NaN
miRNA Regulation of DNA Damage Response	74	74	NaN
IL-4 Signaling Pathway	53	53	NaN
G Protein Signaling Pathways	87	87	NaN
TOR Signaling	33	33	NaN
IL-6 signaling pathway	41	41	NaN
DNA Damage Response	68	68	NaN
MAPK Signaling Pathway	160	160	NaN
Hedgehog Signaling Pathway	15	15	NaN
Phospholipid biosynthesis	0	0	NaN
IL-7 Signaling Pathway	23	23	NaN
Dopamine metabolism	11	11	NaN
Type II diabetes mellitus	19	19	NaN
GPCRs, Class C Metabotropic glutamate, pheromone	15	15	NaN
Signaling Pathways in Glioblastoma	81	81	NaN
miRNAs involved in DNA damage response	18	18	NaN
Farnesoid X Receptor Pathway	12	12	NaN
Mismatch repair	9	9	NaN
Glycogen Metabolism	36	36	NaN
Peptide GPCRs	43	43	NaN
Kit receptor signaling pathway	59	59	NaN
Liver X Receptor Pathway	9	9	NaN
Selenium Metabolism and Selenoproteins	39	39	NaN
TNF alpha Signaling Pathway	88	88	NaN
Iron metabolism in placenta	12	12	NaN
Vitamin A and Carotenoid Metabolism	37	37	NaN
Glycine Metabolism	3	3	NaN
Fatty Acid Biosynthesis	22	22	NaN
Triacylglyceride Synthesis	19	19	NaN
Arylamine metabolism	4	4	NaN
Monoamine Transport	25	25	NaN
Estrogen signaling pathway	22	22	NaN
Pathogenic Escherichia coli infection	52	52	NaN
Aflatoxin B1 metabolism	7	7	NaN
TP53 Network	21	21	NaN
Nanoparticle-mediated activation of receptor signaling	27	27	NaN
Apoptosis-related network due to altered Notch3 in ovarian cancer	53	53	NaN
Quercetin and Nf-kB/ AP-1 Induced Cell Apoptosis	13	13	NaN
Notch Signaling Pathway	43	43	NaN
DNA Damage Response (only ATM dependent)	109	109	NaN
Trans-sulfuration and one carbon metabolism	30	30	NaN
Sulindac Metabolic Pathway	5	5	NaN
Irinotecan Pathway	12	12	NaN
Oxidative Stress	28	28	NaN
Ganglio Sphingolipid Metabolism	17	17	NaN
Differentiation of white and brown adipocyte	23	23	NaN
Senescence and Autophagy in Cancer	99	99	NaN
Iron uptake and transport	99	99	NaN
Glycolysis and Gluconeogenesis	43	43	NaN
Nuclear Receptors in Lipid Metabolism and Toxicity	25	25	NaN
Mitochondrial Gene Expression	19	19	NaN
Arylhydrocarbon receptor (AhR) signaling pathway	24	24	NaN
Transcriptional activation by NRF2	15	15	NaN
NAD Biosynthesis II (from tryptophan)	7	7	NaN
Biogenic Amine Synthesis	10	10	NaN
BMP Signalling and Regulation	12	12	NaN
Osteoclast Signaling	14	14	NaN
Toll-like receptor signaling pathway	81	81	NaN
Non-homologous end joining	8	8	NaN
Retinoblastoma (RB) in Cancer	88	88	NaN
Sulfation Biotransformation Reaction	15	15	NaN
Aryl Hydrocarbon Receptor	45	45	NaN
FAS pathway and Stress induction of HSP regulation	41	41	NaN
Signal Transduction of S1P Receptor	25	25	NaN
Regulation of Microtubule Cytoskeleton	44	44	NaN
Cytoplasmic Ribosomal Proteins	87	87	NaN
Ectoderm Differentiation	134	134	NaN
Signaling of Hepatocyte Growth Factor Receptor	34	34	NaN
Corticotropin-releasing hormone	86	86	NaN
SREBF and miR33 in cholesterol and lipid homeostasis	16	16	NaN
IL-5 Signaling Pathway	38	38	NaN
Leptin signaling pathway	75	75	NaN
TCA Cycle Nutrient Utilization and Invasiveness of Ovarian Cancer	5	5	NaN
MicroRNAs in cardiomyocyte hypertrophy	80	80	NaN
Metastatic brain tumor	7	7	NaN
Phase I biotransformations, non P450	7	7	NaN
Lidocaine metabolism	2	2	NaN
GPCRs, Class A Rhodopsin-like	137	137	NaN
Peroxisomal beta-oxidation of tetracosanoyl-CoA	4	4	NaN
Fatty Acid Beta Oxidation	31	31	NaN
One Carbon Metabolism	26	26	NaN
Amino acid conjugation	0	0	NaN
miRNA targets in ECM and membrane receptors	22	22	NaN
Integrin-mediated Cell Adhesion	96	96	NaN
Apoptosis Modulation and Signaling	86	86	NaN
Dopaminergic Neurogenesis	23	23	NaN
IL-3 Signaling Pathway	44	44	NaN
Nicotine Activity on Chromaffin Cells	4	4	NaN
Neurotransmitter Release Cycle	13	13	NaN
Nuclear Receptors	36	36	NaN
NRF2 pathway	121	121	NaN
TCR Signaling Pathway	79	79	NaN
Tryptophan metabolism	39	39	NaN
SRF and miRs in Smooth Muscle Differentiation and Proliferation	11	11	NaN
Apoptosis Modulation by HSP70	19	19	NaN
SREBP signalling	64	64	NaN
Influenza A virus infection	1	1	NaN
Inflammatory Response Pathway	19	19	NaN
Endothelin Pathways	26	26	NaN
Amyotrophic lateral sclerosis (ALS)	36	36	NaN
Felbamate Metabolism	2	2	NaN
NOD pathway	37	37	NaN
Type II interferon signaling (IFNG)	30	30	NaN
Serotonin Receptor 2 and STAT3 Signaling	4	4	NaN
Nicotine Activity on Dopaminergic Neurons	17	17	NaN
Electron Transport Chain	89	89	NaN
Colchicine Metabolic Pathway	1	1	NaN
Hypertrophy Model	18	18	NaN
Endoderm Differentiation	63	63	NaN
Folate-Alcohol and Cancer Pathway	8	8	NaN
Benzo(a)pyrene metabolism	8	8	NaN
Glucocorticoid & Mineralcorticoid Metabolism	6	6	NaN
Oncostatin M Signaling Pathway	61	61	NaN
Polyol Pathway	3	3	NaN
PPAR Alpha Pathway	20	20	NaN
Diclofenac Metabolic Pathway	4	4	NaN
Striated Muscle Contraction	31	31	NaN
Androgen receptor signaling pathway	87	87	NaN
Integrated Breast Cancer Pathway	159	159	NaN
Matrix Metalloproteinases	19	19	NaN
Metapathway biotransformation	137	137	NaN
miRs in Muscle Cell Differentiation	25	25	NaN