A2604_OPC_3_May.r_1.fq FastQC Report

Basic Statistics

Measure	Value
Filename	A2604_OPC_3_May.r_1.fq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	150042284
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGG	610617	0.40696327976452296	No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT	326759	0.217777943183003	No Hit
CTCTTTTCTTTGTGAAGGGCAGGGCGCCCTGGAATGGGTTCGCCCCGAGA	212250	0.14146012333429955	No Hit
CCCATGCATACCATATAGTAAACCCAAGCCCATGACCACTAACAGGAGCC	208725	0.13911078559694545	No Hit
CGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGACGGGAGG	188249	0.12546396587777883	No Hit
GGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGGA	161900	0.10790291622060352	No Hit
CTTTTCTTTGTGAAGGGCAGGGCGCCCTGGAATGGGTTCGCCCCGAGAGA	152886	0.10189527640088443	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGCGATC	63145	80.57738	2
GCGATCT	67600	75.280815	3
TGGCGCA	167580	73.85641	4
GCGCACG	186505	66.34789	6
CGATCTG	79630	64.29666	4
GTGGCGC	195245	63.490982	3
GGGCGAT	83120	61.440094	1
CGCACGC	203350	61.10327	7
CGGTGGC	212080	58.914177	1
CACGCCT	214240	57.84922	9
GCACGCC	221060	56.2113	8
GGTGGCG	231360	53.683315	2
GGCGCAC	256060	48.53327	5
CGTTGAC	54245	36.870613	1
ATGCATA	108085	29.936575	4
GCATACC	109755	29.25564	6
TACCATA	111595	29.142246	9
ACCGTTG	35295	28.171825	3
AACGCGT	10175	27.352167	8
TGCGGAA	79225	25.58211	1