OPC_A1404_19_Apr.r_1.fq FastQC Report

Basic Statistics

Measure	Value
Filename	OPC_A1404_19_Apr.r_1.fq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	114932173
Sequences flagged as poor quality	0
Sequence length	150
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGG	609111	0.5299743179831813	No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT	335206	0.29165549667280716	No Hit
TGCGGAACCATGGCCAGCCCGCTGCGCTCCTTGATGCTACTGCTGGCCGT	185668	0.16154571444498836	No Hit
CGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGACGGGAGG	183905	0.1600117662440786	No Hit
CTCTTTTCTTTGTGAAGGGCAGGGCGCCCTGGAATGGGTTCGCCCCGAGA	142265	0.12378170210007254	No Hit
GGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGACAGGAGGA	134726	0.11722218112068584	No Hit
ACTAGACACATCCACATGATTTATTACAATCATCTCCTCAATAGCCACAC	127383	0.11083319550566575	No Hit
CCCATGCATACCATATAGTAAACCCAAGCCCATGACCACTAACAGGAGCC	122493	0.10657851218039704	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGCGATC	57480	90.139786	2
GCGATCT	58860	88.17503	3
TGGCGCA	153265	79.8557	4
CGATCTG	68235	76.08151	4
CGCACGC	180535	67.97451	7
GTGGCGC	180555	67.92149	3
GCGCACG	181000	67.628265	6
CACGCCT	186620	65.72689	9
CGGTGGC	197955	62.32404	1
GCACGCC	199465	61.55231	8
GGTGGCG	214545	57.27738	2
GGGCGAT	94810	54.877293	1
GGCGCAC	231380	53.139305	5
AACGCGT	11615	43.403576	8
ACTAGAC	51820	39.34831	1
TGCGGAA	77515	36.944233	1
CGTTGAC	38485	34.19674	1
CTAACGC	15360	32.727116	6
TCTAACG	16185	30.659012	5
GCGGAAC	94815	30.543804	2